Publications


Journals

  1. S. Katsigiannis, E. Zacharia, D. Maroulis, MIGS-GPU Microarray Image Gridding and Segmentation on the GPU. Accepted for publication in IEEE Journal of Biomedical and Health Informatics, 2016.
  2. E. Kostopoulou, S. Katsigiannis, D. Maroulis, "2D-gel spot detection and segmentation based on modified image-aware grow-cut and regional intensity information", Elsevier Computer Methods and Programs in Biomedicine, vol. 122, no. 1, pp. 26-39, 2015. doi: 10.1016/j.cmpb.2015.06.007
  3. S. Katsigiannis, E. Zacharia, D. Maroulis, Grow-Cut Based Automatic cDNA Microarray Image Segmentation, IEEE Trans. on NanoBioscience, vol. 14, no. 1, pp. 138-145, 2015. doi: 10.1109/TNB.2014.2369961
  4. S. Katsigiannis, E. Keramidas, D. Maroulis, "A Contourlet Transform Feature Extraction Scheme for Ultrasound Thyroid Texture Classification", Engineering Intelligent Systems, Special issue: Artificial Intelligence Applications and Innovations 2010, vol. 18, no. 3/4, 2010.

E-prints

  1. S. Katsigiannis, G. Papaioannou, D. Maroulis, "CVC: The Contourlet Video Compression algorithm for real-time applications", arXiv.org, arXiv:1510.00561, 2015. doi: arXiv:1510.00561

Conferences

  1. E. Kostopoulou, S. Katsigiannis, D. Maroulis, "A Custom Grow-cut Based Scheme for 2D-gel Image Segmentation", 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Milano, Italy, 25-29 August, 2015.
  2. S. Katsigiannis, V. Dimitsas, D. Maroulis, "A GPU vs CPU performance evaluation of an experimental video compression algorithm", 7th International Workshop on Quality of Multimedia Experience (QoMEX 2015), Pylos, Greece, 26-29 May, 2015.
  3. S Katsigiannis, G Papaioannou, D Maroulis, A GPU based real-time video compression method for video conferencing, in Proceedings of the 18th International Conference on Digital Signal Processing (DSP 2013), 1-3 July 2013.
  4. S. Katsigiannis, D. Maroulis, Parallel computing techniques for performance enhancement of a cDNA microarray gridding algorithm, 2013 IEEE International Symposium on Signal Processing and Information Technology (ISSPIT), 2013.
  5. S. Katsigiannis, E. Zacharia, D. Maroulis, "Enhancing the Performance of a Microarray Gridding Algorithm via GPU Computing Techniques",13th IEEE International Conference on BioInformatics and BioEngineering (BIBE), Chania, Greece, 2013.
  6. S. Katsigiannis, G. Papaioannou, D. Maroulis, "A Contourlet Transform based algorithm for real-time video encoding", SPIE Photonics Europe, Real-Time Image and Video processing Conference, 16-19 April, Brussels, Belgium, 2012.
  7. S. Katsigiannis, E. Keramidas, D. Maroulis, "Contourlet Transform for Texture Representation of Ultrasound Thyroid Images", "Proceedings of 6th IFIP Conference on Artificial Intelligence Applications & Innovations" (AIAI 2010), 6-7 October, Larnaca, Cyprus, 2010.
  8. S. Katsigiannis, "Contourlet Transform and Support Vector Machines for Image Analysis and Processing", 1st International Conference for Undergraduate and Graduate Students in Informatics and Related Applications (EUREKA! 2010), 14-16 October, Patras/Ancient Olympia, Greece, 2010.

Book chapters

  1. S. Katsigiannis, E. Keramidas, D. Maroulis, "Fuzzy Local Binary Patterns", Local Binary Patterns: New Variants and Applications, edited by Brahnam S., Jain L.C., Nanni L. and Lumini A., Springer, ISBN 978-3-642-39288-7, 2013. (invited)
  2. S. Katsigiannis, G. Papaioannou, D. Maroulis, "A Real-Time Video Encoding Scheme Based on the Contourlet Transform", Design and Architectures for Digital Signal Processing, edited by Gustavo Ruiz and Juan A. Michell, ISBN 978-953-51-0874-0, 2012. (invited)

Greek conferences

  1. E. Kostopoulou, S. Katsigiannis, D. Maroulis, K.I. Pappa, N.P. Anagnou, "Spot detection in 2D-gel electrophoresis images", 6th Panhellenic Conference on Biomedical Technology (ΕΛΕΒΙΤ), Athens, Greece, 6-8 May, 2015.
  2. E. Kostopoulou, S. Katsigiannis, D. Maroulis, K. I. Pappa, N. P. Anagnou, "A novel approach for accurate 2D-gel image segmentation", 10th Conference of the Hellenic Society for Computational Biology & Bioinformatics, Athens, 2015.

Theses

  1. Graduate Thesis, Image analysis and processing using the Contourlet Transform and application in biomedical data. National and Kapodistrian University of Athens, Department of Informatics & Telecommunications. Supervisor: Prof. Dimitris Maroulis.
  2. M.Sc. Thesis, Acceleration of the Contourlet Transform. Athens University of Economics and Business, Department of Informatics. Supervisor: Assist. Prof. Georgios Papaioannou.
  3. Ph.D. Thesis, Advanced GPU-based methods for analysis and processing of biomedical images and general purpose video. National and Kapodistrian University of Athens, Department of Informatics & Telecommunications. Supervisor: Prof. Dimitris Maroulis.

Other

  1. S. Katsigiannis, "Image Analysis and Processing Using the Contourlet Transform and Application in Biomedical Data" (Graduate Thesis), in the 2009 annual selection of B.Sc. and M.Sc. theses of the Department of Informatics & Telecommunications, National and Kapodistrian University of Athens, 2009.